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Processamento e análise de imagens

Processamento e análise de imagens

O IDOR desenvolve pesquisas em radiologia pulmonar avançada, usando desde técnicas tradicionais como a tomografia até exames mais modernos como o PET-CT para coletar imagens morfológicas e funcionais, que permitem uma análise da atividade celular in vivo. Uma das principais aplicações destes estudos é a avaliação de inflamação nos pacientes com tuberculose, câncer e outras doenças que afetam os pulmões.

Em interseção com a área neurociências, imagens obtidas por ressonância magnética funcional são aliadas a softwares e outros recursos tecnológicos para diversas investigações sobre o cérebro, que estudam desde malformações adquiridas ou congênitas, como a agenesia do corpo caloso, até o comportamento cerebral em relação a assuntos cotidianos, como altruísmo, crenças e pertencimento de grupo.

A equipe também trabalha no desenvolvimento de técnicas de inteligência artificial para avaliação de tomografias. Um estudo recentemente publicado nesta linha se valeu da inteligência artificial para quantificar a presença de doença pulmonar intersticial em pacientes com esclerose sistêmica. A pesquisa comparou exames de um grande número de pacientes e de pessoas saudáveis para desenvolver um método capaz de reconhecer e quantificar a doença pulmonar intersticial. Uma das principais vantagens do método é reduzir o peso da subjetividade do profissional que analisa as imagens na avaliação dos casos.

 

Pesquisadores
Notícias Relacionadas
Principais Publicações

Carvalho ARS, Guimarães A, Garcia TSO, Madeira Werberich G, Ceotto VF, Bozza FA, Rodrigues RS, Pinto JSF, Schmitt WR, Zin WA, França M. Estimating COVID-19 Pneumonia Extent and Severity From Chest Computed Tomography. Front Physiol. 2021 Feb 15;12:617657. PMID: 33658944; PMCID: PMC7917083.

Gomes P, Bastos HNE, Carvalho A, Lobo A, Guimarães A, Rodrigues RS, Zin WA, Carvalho ARS. Pulmonary Emphysema Regional Distribution and Extent Assessed by Chest Computed Tomography Is Associated With Pulmonary Function Impairment in Patients With COPD. Front Med (Lausanne). 2021 Sep 23;8:705184. PMID: 34631729; PMCID: PMC8494782.

Barros MC, Altmayer S, Carvalho AR, Rodrigues R, Zanon M, Mohammed TL, Patel P, Mohammad AA, Mehrad B, Chatkin JM, Hochhegger B. Quantitative Computed Tomography: What Clinical Questions Can it Answer in Chronic Lung Disease? Lung. 2022 Aug;200(4):447-455. Epub 2022 Jun 25. PMID: 35751660; PMCID: PMC9378468.

Rodrigues RS, Motta Ribeiro G, Barreto MM, Zin WA, de Toledo-Mendes J, Martins PAG, de Almeida SA, Basílio R, Martins-Gonçalves R, Hottz ED, Bozza PT, Bozza FA, Carvalho ARS, Rosado-de-Castro PH. Increased Lung Immune Metabolic Activity in COVID-19 Survivors. Clin Nucl Med. 2022 Dec 1;47(12):1019-1025. Epub 2022 Aug 26. PMID: 36026599; PMCID: PMC9653065.

Hochhegger B, Pasini R, Roncally Carvalho A, Rodrigues R, Altmayer S, Kayat Bittencourt L, Marchiori E, Forghani R. Artificial Intelligence for Cardiothoracic Imaging: Overview of Current and Emerging Applications. Semin Roentgenol. 2023 Apr;58(2):184-195. Epub 2023 Mar 5. PMID: 37087139.

Parente DB, Paiva FF, Oliveira Neto JA, Machado-Silva L, Figueiredo FA, Lanzoni V, Campos CF, do Brasil PE, Gomes Mde B, Perez Rde M, Rodrigues RS. Intravoxel Incoherent Motion Diffusion Weighted MR Imaging at 3.0 T: Assessment of Steatohepatitis and Fibrosis Compared with Liver Biopsy in Type 2 Diabetic Patients. PLoS One. 2015 May 11;10(5):e0125653. PMID: 25961735; PMCID: PMC4427182.

Parente DB, Oliveira Neto JA, Brasil PEAA, Paiva FF, Ravani JPR, Gomes MB, Lanzoni V, Campos CFF, Machado-Silva L, Perez RM, Rodrigues RS. Preperitoneal fat as a non-invasive marker of increased risk of severe non-alcoholic fatty liver disease in patients with type 2 diabetes. J Gastroenterol Hepatol. 2018 Feb;33(2):511-517. PMID: 28726335.

Parente DB, Perazzo H, Paiva FF, Campos CFF, Saboya CJ, Pereira SE, Silva FDE, Rodrigues RS, Perez RM. Higher cut-off values of non-invasive methods might be needed to detect moderate-to-severe steatosis in morbid obese patients: a pilot study. Sci Rep. 2020 Sep 14;10(1):15007. PMID: 32929103; PMCID: PMC7490697.

Amorim VB, Parente DB, Paiva FF, Oliveira Neto JA, Miranda AA, Moreira CC, Fernandes FF, Campos CFF, Leite NC, Perez RM, Rodrigues RS. Can gadoxetic acid-enhanced magnetic resonance imaging be used to avoid liver biopsy in patients with nonalcoholic fatty liver disease? World J Hepatol. 2020 Sep 27;12(9):661-671. PMID: 33033571; PMCID: PMC7522564.

Eiras-Araújo AL, Parente DB, da Silva AC, da Motta Rezende GF, Mendes GB, Luiz RR, de Oliveira Souza R, da Costa Generalis S, Rodrigues RS, Perez RM. Relative enhancement index can be used to quantify liver function in cirrhotic patients that undergo gadoxetic acid-enhanced MRI. Eur Radiol. 2023 Jan 18. Epub ahead of print. PMID: 36651953.

Guimarães JM, Guimarães IC, Duarte ME, Vieira T, Vianna VF, Fernandes MB, Vieira AR, Casado PL. Polymorphisms in BMP4 and FGFR1 genes are associated with fracture non-union. J Orthop Res. 2013 Dec;31(12):1971-9. Epub 2013 Aug 12. PMID: 23939983.

Vianna VF, Bonfim DC, Cavalcanti Ados S, Fernandes MC, Kahn SA, Casado PL, Lima IC, Murray SS, Murray EJ, Duarte ME. Late adherent human bone marrow stromal cells form bone and restore the hematopoietic microenvironment in vivo. Biomed Res Int. 2013;2013:790842. Epub 2013 Apr 24. PMID: 23710460; PMCID: PMC3655461.

Guimarães JA, Duarte ME, Fernandes MB, Vianna VF, Rocha TH, Bonfim DC, Casado PL, do Val Guimarães IC, Velarde LG, Dutra HS, Giannoudis PV. The effect of autologous concentrated bone-marrow grafting on the healing of femoral shaft non-unions after locked intramedullary nailing. Injury. 2014 Nov;45 Suppl 5:S7-S13. PMID: 25528626.

Ramos RN, Rodriguez C, Hubert M, Ardin M, Treilleux I, Ries CH, Lavergne E, Chabaud S, Colombe A, Trédan O, Guedes HG, Laginha F, Richer W, Piaggio E, Barbuto JAM, Caux C, Ménétrier-Caux C, Bendriss-Vermare N. CD163+ tumor-associated macrophage accumulation in breast cancer patients reflects both local differentiation signals and systemic skewing of monocytes. Clin Transl Immunology. 2020 Feb 13;9(2):e1108. PMID: 32082570; PMCID: PMC7017151.

Leruste A, *Ramos RN, *Tosello J, Tauziède-Espariat A, Brohard S, Han ZY, Beccaria K, Andrianteranagna M, Caudana P, Nikolic J, Chauvin C, Niborski LL, Manriquez V, Richer W, Masliah-Planchon J, et al. Clonally Expanded T Cells Reveal Immunogenicity of Rhabdoid Tumors. Cancer Cell. 2019 Dec 9;36(6):597-612.e8. Epub 2019 Nov 7. PMID: 31708437. (*igual contribuição)

Bourdely P, Anselmi G, Vaivode K, Ramos RN, Missolo-Koussou Y, Hidalgo S, Tosselo J, Nuñez N, Richer W, Vincent-Salomon A, Saxena A, Wood K, Lladser A, Piaggio E, Helft J, Guermonprez P. Transcriptional and Functional Analysis of CD1c+ Human Dendritic Cells Identifies a CD163+ Subset Priming CD8+CD103+ T Cells. Immunity. 2020 Aug 18;53(2):335-352.e8. Epub 2020 Jun 30. PMID: 32610077; PMCID: PMC7445430.

Nader GPF, Agüera-Gonzalez S, Routet F, Gratia M, Maurin M, Cancila V, Cadart C, Palamidessi A, Ramos RN, San Roman M, Gentili M, Yamada A, Williart A, Lodillinsky C, Lagoutte E, Villard C, Viovy JL, Tripodo C, Galon J, Scita G, Manel N, Chavrier P, Piel M. Compromised nuclear envelope integrity drives TREX1-dependent DNA damage and tumor cell invasion. Cell. 2021 Sep 30;184(20):5230-5246.e22. Epub 2021 Sep 21. PMID: 34551315.

Nalio Ramos R, Missolo-Koussou Y, Gerber-Ferder Y, Bromley CP, Bugatti M, Núñez NG, Tosello Boari J, Richer W, Menger L, Denizeau J, Sedlik C, Caudana P, Kotsias F, Niborski LL, Viel S, Bohec M, Lameiras S, Baulande S, Lesage L, Nicolas A, Meseure D, Vincent-Salomon A, Reyal F, Dutertre CA, Ginhoux F, Vimeux L, Donnadieu E, Buttard B, Galon J, Zelenay S, Vermi W, Guermonprez P, Piaggio E, Helft J. Tissue-resident FOLR2+ macrophages associate with CD8+ T cell infiltration in human breast cancer. Cell. 2022 Mar 31;185(7):1189-1207.e25. Epub 2022 Mar 23. PMID: 35325594.

Ferraz DA, Vasquez LM, Preti RC, Motta A, Sophie R, Bittencourt MG, Sepah YJ, Monteiro ML, Nguyen QD, Takahashi WY. A randomized controlled trial of panretinal photocoagulation with and without intravitreal ranibizumab in treatment-naive eyes with non-high-risk proliferative diabetic retinopathy. Retina. 2015 Feb;35(2):280-7. PMID: 25272318.

Motta AAL, Bonanomi MTBC, Ferraz DA, Preti RC, Sophie R, Abalem MF, Queiroz MS, Pimentel SLG, Takahashi WY, Damico FM. Short-term effects of intravitreal bevacizumab in contrast sensitivity of patients with diabetic macular edema and optimizing glycemic control. Diabetes Res Clin Pract. 2019 Mar;149:170-178. Epub 2019 Feb 11. PMID: 30763599.

Wagner SK, Fu DJ, Faes L, Liu X, Huemer J, Khalid H, Ferraz D, Korot E, Kelly C, Balaskas K, Denniston AK, Keane PA. Insights into Systemic Disease through Retinal Imaging-Based Oculomics. Transl Vis Sci Technol. 2020 Feb 12;9(2):6. Erratum in: Transl Vis Sci Technol. 2021 Jul 1;10(8):13. PMID: 32704412; PMCID: PMC7343674.

Moraes G, Fu DJ, Wilson M, Khalid H, Wagner SK, Korot E, Ferraz D, Faes L, Kelly CJ, Spitz T, Patel PJ, Balaskas K, Keenan TDL, Keane PA, Chopra R. Quantitative Analysis of OCT for Neovascular Age-Related Macular Degeneration Using Deep Learning. Ophthalmology. 2021 May;128(5):693-705. Epub 2020 Sep 24. PMID: 32980396; PMCID: PMC8528155.

Korot, E., Guan, Z., Ferraz, Det al. Code-free deep learning for multi-modality medical image classification. Nat Mach Intell. 3, 288–298 (2021).

Tovar-Moll, F. ; Monteiro, M. ; Andrade, J. ; Bramati, I. E. ; Vianna-Barbosa, R. ; Marins, T. ; Rodrigues, E. C. ; Dantas, N. ; Behrens, T. E. J. ; De Oliveira-Souza, R. ; Moll, J. ; Lent, R. . Structural and functional brain rewiring clarifies preserved interhemispheric transfer in humans born without the corpus callosum. Proceedings of the National Academy of Sciences of the United States of America, v. 111, p. 7843, 2014. PMID: 24821757; PMCID: PMC4040546.

Oliveira, LA ; Martins, C. ; Horsczaruk, C.H.R. ; Silva, D.C.S ; Vasconcellos, L. F. ; Lopes, A. J. ; Mainenti, M. R. M. ; Rodrigues, E.C. . Partial Body Weight-Supported Treadmill Training in Spinocerebellar Ataxia. Rehabilitation Research and Practice, v. 2018, p. 1-8, 2018.

Marins, T. ; Rodrigues, E.C. ; Bortolini, T. ; Melo, Bruno ; Moll, J. ; Tovar-Moll, F. . Structural and Functional Connectivity Changes in Response to Short-term Neurofeedback Training with Motor Imagery. Neuroimage, v. 194, p. 283, 2019.

Vieira, T. ; Carvalho, T. L. ; Oliveira, L. A. S. ; Horsczaruk, C. H. ; Freitas, G. R. ; Tovar-Moll, F ; Rodrigues, E.C. Postural Muscle Unit Plasticity in Stroke Survivors: Altered Distribution of Gastrocnemius’ Action Potentials. Frontiers in Neurology, v. 10, p. 686, 2019.

Silveira de Souza A., de Oliveira-Souza R., Moll J., Tovar-Moll F., Andreiuolo P.A., Bottino C.M.C.. Contribution of 1H Spectroscopy to a Brief Cognitive-Functional Test Battery for the Diagnosis of Mild Alzheimer’s Disease. Dement Geriatr Cogn Disord 2011;32:351–361.

Souza ASOliveira-Szjenfeld PS, Melo ASO,  Souza LAM, Batista AGM, Tovar-Moll F. Imaging findings in congenital Zika virus infection syndrome: an update. Child’s Nervous System 2018; 34:85-93.

Drummond C, Coutinho G, Monteiro MC, Assuncao N, Teldeschi A, de Souza AS, Oliveira N, Bramati I, Sudo FK, Vanderboght B, Brandao CO, Fonseca RP, de Oliveira-Souza R, et al. Narrative impairment, white matter damage and CSF biomarkers in the Alzheimer’s disease spectrum. Aging (Albany NY). 2019;11:9188-9208.

Sudo FK, de Souza AS, Drummond C, Assuncao N, Teldeschi A, Oliveira N, et al. Inter-method and anatomical correlates of episodic memory tests in the Alzheimer’s Disease spectrum. PLoS ONE 2019; 14(10): e0223731.

Calil V, Souza AS, Sudo FK, Santiago-Bravo G, Assunção N, Drummond C, et al. Anosognosia for memory in dementia with Lewy bodies compared with Alzheimer’s disease. International Journal of Geriatric Psychiatry 2021; 36(7):1059-1064.

Silva BRA, Rodrigues RS, Rufino R, Costa CH, Vilela VS, Levy RA, Guimarães ARM, Carvalho ARS, Lopes AJ. Computed tomography trachea volumetry in patients with scleroderma: Association with clinical and functional findings. PLoS One. 2018 Aug 1;13(8):e0200754. PMID: 30067820; PMCID: PMC6070209.

Wang LM, Wu Q, Kirk RA, Horn KP, Ebada Salem AH, Hoffman JM, Yap JT, Sonnen JA, Towner RA, Bozza FA, Rodrigues RS, Morton KA. Lipopolysaccharide endotoxemia induces amyloid-β and p-tau formation in the rat brain. Am J Nucl Med Mol Imaging. 2018 Apr 25;8(2):86-99. PMID: 29755842; PMCID: PMC5944824.

Carvalho ARS, Guimarães AR, Sztajnbok FR, Rodrigues RS, Silva BRA, Lopes AJ, Zin WA, Almeida I, França MM. Automatic Quantification of Interstitial Lung Disease From Chest Computed Tomography in Systemic Sclerosis. Front Med (Lausanne). 2020 Sep 25;7:577739. PMID: 33102508; PMCID: PMC7546366.

Carvalho ARS, Guimarães A, Werberich GM, de Castro SN, Pinto JSF, Schmitt WR, França M, Bozza FA, Guimarães BLDS, Zin WA, Rodrigues RS. COVID-19 Chest Computed Tomography to Stratify Severity and Disease Extension by Artificial Neural Network Computer-Aided Diagnosis. Front Med (Lausanne). 2020 Dec 4;7:577609. PMID: 33344471; PMCID: PMC7746855.

Carvalho ARS, Guimarães A, Garcia TSO, Madeira Werberich G, Ceotto VF, Bozza FA, Rodrigues RS, Pinto JSF, Schmitt WR, Zin WA, França M. Estimating COVID-19 Pneumonia Extent and Severity From Chest Computed Tomography. Front Physiol. 2021 Feb 15;12:617657. PMID: 33658944; PMCID: PMC7917083.

Szczupak D, Liu C, Yen CCC, Choi SH, Meireles F, Victorino C; IRC5 Consortium, Richards L, Lent R, Silva AC, Tovar-Moll F. Long-distance aberrant heterotopic connectivity in a mouse strain with a high incidence of callosal anomalies. Neuroimage. 2020 Aug 15;217:116875.

T Marins, EC Rodrigues, T Bortolini, B Melo, J Moll, F Tovar-Moll. Structural and functional connectivity changes in response to short-term neurofeedback training with motor imagery. Neuroimage. 2019;194, 283-290.

Soares de Oliveira-Szejnfeld P, Levine D, Melo AS, Amorim MM, Batista AG, Chimelli L, Tanuri A, Aguiar RS, Malinger G, Ximenes R, Robertson R, Szejnfeld J, Tovar-Moll F. Congenital Brain Abnormalities and Zika Virus: What the Radiologist Can Expect to See Prenatally and Postnatally. Radiology. 2016; 1(1), 203-18.

Tovar-Moll F, Monteiro M, Andrade J, Bramati IE, Vianna-Barbosa R, Marins T, Rodrigues E, Dantas N, Behrens TE, de Oliveira-Souza R, et al. Structural and functional brain rewiring clarifies preserved interhemispheric transfer in humans born without the corpus callosum. Proc Natl Acad Sci U S A. 2014; 111(21), 7843-8.

Simões EL, Bramati I, Rodrigues E, Franzoi A, Moll J, Lent R, Tovar-Moll F. Functional expansion of sensorimotor representation and structural reorganization of callosal connections in lower limb amputees. J Neurosci. 2012; 32(9), 3211-20.

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